PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G189600.1.p
Common NamePRUPE_ppa022186mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 91aa    MW: 10368.8 Da    PI: 8.5133
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G189600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.4e-0616561454
                        HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                        d+i++   +L+ llP+ + + ++  +s ++iLe+++ YI+ L
  Prupe.5G189600.1.p 16 DEIKELVLKLKPLLPQlD-HRRNASVSASSILEETCSYIRRL 56
                        578888899*******55.889999***************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.68256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-71673IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.22E-71671IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MSSRRSSSRA SKLADDEIKE LVLKLKPLLP QLDHRRNASV SASSILEETC SYIRRLNKEV  60
DDLSQRLSQL LDSADITDVD EQLIRRLFQR *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210662.14e-56hypothetical protein PRUPE_ppa022186mg
SwissprotF4JCN92e-24PRE4_ARATH; Transcription factor PRE4
TrEMBLM5WEZ04e-56M5WEZ0_PRUPE; Uncharacterized protein
STRINGGLYMA08G47171.11e-26(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47710.12e-07BANQUO 3